Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022563.1 Corchorus olitorius cultivar O-4 contig22596, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32076

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9378--9510
36
3.7
35
82
2
131
18
21
18
42
1.89
17852--17897
21
2.2
21
84
7
58
65
8
8
17
1.45
20828--20979
76
2.0
76
81
7
175
17
28
28
25
1.97
26949--26997
21
2.3
21
82
6
55
14
28
16
40
1.87
28132--28173
16
2.7
16
85
3
50
80
2
9
7
0.97
28126--28173
15
3.2
14
82
11
51
81
2
8
8
0.96
28123--28175
21
2.5
22
81
3
54
79
1
11
7
1.01
29756--29897
76
1.9
76
81
8
173
16
27
30
25
1.97

Tables:   1

The End!