Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022569.1 Corchorus olitorius cultivar O-4 contig22602, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26051

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--39
2
19.0
2
100
0
76
50
0
0
50
1.00
5667--5760
16
6.0
15
76
8
62
6
37
44
11
1.67
5687--5760
16
4.6
16
80
6
69
5
36
44
13
1.67
5809--5838
12
2.4
13
94
5
53
80
3
0
16
0.85
5881--5922
18
2.4
17
84
7
57
69
0
30
0
0.89
7266--7310
14
3.5
12
84
9
54
31
0
11
57
1.33
9368--9414
6
8.2
6
82
15
55
72
17
10
0
1.12
11019--11356
178
1.9
178
84
4
459
36
16
13
34
1.88
11032--11401
178
2.1
178
81
4
424
37
15
14
33
1.88
16278--16313
17
2.1
17
94
0
63
50
0
0
50
1.00
18428--18550
58
2.1
58
84
3
158
43
4
9
43
1.56
19608--19706
51
1.9
52
83
2
128
51
18
5
25
1.66
25205--25239
13
2.7
13
100
0
70
31
22
14
31
1.94

Tables:   1

The End!