Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022584.1 Corchorus olitorius cultivar O-4 contig22617, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19377

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2594--2633
20
2.0
20
85
0
53
65
17
7
10
1.46
6520--6578
7
8.4
7
96
0
100
25
0
18
55
1.42
6496--6571
28
2.7
28
87
0
98
25
2
18
53
1.57
6495--6579
21
4.0
21
81
0
107
24
2
20
52
1.58
6712--6789
33
2.4
33
91
0
120
32
6
17
43
1.75
6893--7153
54
4.8
54
85
4
330
36
21
14
27
1.93
6907--7153
108
2.3
108
90
0
386
36
22
14
27
1.93
7250--7642
74
5.3
74
83
3
425
44
15
16
23
1.86
7260--7718
148
3.1
148
83
3
550
44
16
16
23
1.86
7260--7744
37
13.1
36
77
6
380
43
15
16
23
1.86
12063--12116
6
8.5
6
88
11
81
29
0
0
70
0.88
13662--13698
18
2.1
18
89
0
56
45
5
10
37
1.62
14544--14579
19
1.9
18
88
5
54
41
8
22
27
1.82
16077--16175
32
3.0
32
95
2
171
32
26
19
22
1.97

Tables:   1

The End!