Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022593.1 Corchorus olitorius cultivar O-4 contig22626, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12344

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
517--1100
294
2.0
292
90
3
915
42
16
16
24
1.88
6255--6298
20
2.2
20
96
4
81
22
9
6
61
1.50
10165--10206
2
22.5
2
86
13
63
54
0
0
45
0.99
10254--10522
89
3.0
89
95
0
475
27
15
17
38
1.91
11876--12135
127
2.0
130
88
3
391
38
10
1
49
1.48

Tables:   1

The End!