Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022601.1 Corchorus olitorius cultivar O-4 contig22634, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17781

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7644--7753
30
3.7
30
96
0
202
27
20
23
29
1.99
7752--7791
19
2.1
19
85
0
53
37
17
20
25
1.94
7667--7858
103
1.8
105
85
2
271
30
17
20
30
1.96
7773--7929
32
4.9
32
73
6
122
34
15
15
35
1.89
7773--7925
65
2.4
62
90
3
234
34
15
15
33
1.90
9955--10018
33
1.9
33
83
0
83
29
23
20
26
1.99
12714--12750
19
2.0
18
94
5
65
81
0
18
0
0.70
13133--13162
14
2.1
14
93
6
51
13
0
10
76
1.01
13141--13165
13
1.9
13
100
0
50
16
0
8
76
1.02
14726--14769
3
15.0
3
90
4
72
63
0
2
34
1.07

Tables:   1

The End!