Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022605.1 Corchorus olitorius cultivar O-4 contig22638, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3853

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2923--2979
24
2.4
24
79
5
62
57
1
17
22
1.49
3000--3225
4
58.5
4
67
15
111
66
0
6
25
1.21
2999--3187
23
7.7
27
67
22
114
64
1
7
26
1.27
2982--3152
46
3.7
46
89
3
222
64
1
7
26
1.27
3027--3230
11
18.1
11
72
9
90
68
0
6
24
1.16
3021--3224
46
4.5
44
89
4
189
67
0
6
25
1.18
3067--3225
7
22.6
7
69
19
66
67
0
5
26
1.12
3068--3228
71
2.2
72
81
10
195
68
0
5
25
1.11

Tables:   1

The End!