Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022612.1 Corchorus olitorius cultivar O-4 contig22645, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44868

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1746--1839
45
2.2
43
86
7
129
39
21
4
35
1.73
3687--3767
42
1.9
42
92
0
135
33
18
16
32
1.93
3697--3913
42
5.4
38
77
11
136
33
15
17
34
1.91
3729--3871
38
3.7
38
79
6
128
32
14
17
35
1.90
15709--15847
68
2.0
68
98
0
269
23
17
15
44
1.86
16539--16567
2
15.0
2
92
7
51
51
0
0
48
1.00
26742--26864
3
40.7
3
91
4
203
63
1
0
34
1.04
28127--28261
49
2.8
47
84
6
164
47
6
17
28
1.73
32950--32987
10
3.6
11
79
13
53
73
0
21
5
1.02
32949--32988
20
2.0
21
95
5
73
72
0
22
5
1.04
33251--33280
15
2.0
15
100
0
60
26
20
26
26
1.99
34958--35014
25
2.4
24
88
5
80
31
5
3
59
1.36
42565--42631
34
2.0
34
88
5
100
38
7
5
47
1.56

Tables:   1

The End!