Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022620.1 Corchorus olitorius cultivar O-4 contig22653, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27398

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1810--2206
58
6.8
58
92
1
634
24
23
15
36
1.93
3684--3721
19
2.0
19
100
0
76
5
36
26
31
1.79
7018--7338
42
7.9
41
81
7
316
36
15
15
32
1.90
7019--7339
41
7.8
41
78
10
189
36
15
15
32
1.90
7018--7342
78
4.0
84
80
9
266
36
15
15
32
1.90
7396--7599
31
6.7
30
72
14
143
35
20
18
25
1.95
7431--7593
60
2.7
60
87
7
258
35
20
18
25
1.95
7462--7559
29
3.3
28
69
16
81
35
18
18
27
1.94
7632--7800
31
5.6
31
68
16
129
27
21
20
30
1.98
7667--7765
29
3.4
28
67
20
76
27
22
19
31
1.98
7630--7796
60
2.8
60
93
0
289
27
22
19
30
1.98
8330--8373
22
2.0
21
82
4
52
54
22
9
13
1.67
20053--20089
19
1.9
19
94
0
65
54
27
13
5
1.61

Tables:   1

The End!