Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022626.1 Corchorus olitorius cultivar O-4 contig22659, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9566

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3812--3904
34
2.7
34
81
0
114
23
27
10
37
1.88
4483--4784
122
2.5
123
83
2
356
30
26
28
14
1.95
4806--5106
142
2.1
142
88
0
440
36
23
27
13
1.92
5167--5219
25
2.1
25
82
0
61
32
26
33
7
1.84
5138--5306
91
1.9
91
81
2
205
32
25
30
11
1.92
5366--5423
26
2.3
26
77
14
66
32
25
27
13
1.94
5438--5486
25
2.0
25
83
0
62
24
28
40
6
1.79
6634--6705
27
2.6
27
86
2
90
38
27
13
19
1.90
6660--6712
27
2.0
27
92
0
88
35
24
20
18
1.95
7093--7144
24
2.2
24
82
6
61
28
7
9
53
1.61

Tables:   1

The End!