Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022628.1 Corchorus olitorius cultivar O-4 contig22661, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45700

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2597--2632
13
2.8
12
88
12
54
36
0
0
63
0.94
3133--3268
41
3.3
41
75
4
139
20
13
17
48
1.80
4745--4797
26
2.0
26
96
0
97
43
26
16
13
1.85
13932--13966
18
1.9
18
100
0
70
34
11
25
28
1.91
14212--14252
3
13.7
3
100
0
82
65
0
0
34
0.93
15266--15869
30
19.9
30
80
7
465
30
20
18
30
1.96
15266--15530
31
8.7
31
95
1
385
33
21
16
27
1.95
19447--19760
127
2.6
123
79
10
342
23
19
18
37
1.94
26113--27026
452
2.0
453
96
1
1706
32
12
14
41
1.82
27070--27101
16
2.0
16
93
0
55
43
6
3
46
1.44
28278--28311
14
2.4
14
90
0
50
23
11
0
64
1.26
36928--37304
189
2.0
189
97
1
720
27
19
17
35
1.94
38183--38209
6
4.5
6
100
0
54
18
81
0
0
0.69

Tables:   1

The End!