Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022629.1 Corchorus olitorius cultivar O-4 contig22662, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25368

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4264--4321
19
2.9
20
87
5
82
29
22
12
36
1.90
11673--11697
13
1.9
13
100
0
50
60
0
0
40
0.97
16298--16366
27
2.6
27
90
0
111
39
8
10
42
1.70
17938--17973
18
2.0
18
100
0
72
44
5
22
27
1.75
20877--21062
93
2.0
93
95
0
336
35
14
16
33
1.89
21221--21283
27
2.3
27
88
0
99
39
6
11
42
1.66
22965--22999
17
1.9
19
88
11
56
11
8
20
60
1.57

Tables:   1

The End!