Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022636.1 Corchorus olitorius cultivar O-4 contig22669, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8267

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
636--740
26
3.9
27
81
7
99
38
23
14
23
1.92
666--742
28
2.8
28
88
2
111
40
20
15
23
1.91
993--1505
35
14.7
35
91
2
741
28
21
19
30
1.97
1528--1759
50
4.6
50
91
0
374
28
13
27
30
1.94
1844--2130
79
3.6
79
94
0
475
35
13
21
30
1.91
2522--2762
50
4.8
50
92
0
365
36
12
15
35
1.85
3355--3398
5
7.7
6
85
14
58
15
0
15
68
1.22
7676--7706
16
1.9
16
93
0
53
9
6
0
83
0.79

Tables:   1

The End!