Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022643.1 Corchorus olitorius cultivar O-4 contig22676, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10989

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1048--1097
21
2.4
21
86
6
66
24
40
30
6
1.79
3279--3322
21
2.1
21
87
4
63
45
9
9
36
1.68
3279--3323
20
2.2
20
84
7
56
44
8
11
35
1.71
6110--6160
21
2.4
21
100
0
102
17
54
19
7
1.67
10098--10122
7
3.6
7
100
0
50
0
36
0
64
0.94
10913--10939
4
6.8
4
100
0
54
51
0
0
48
1.00

Tables:   1

The End!