Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022648.1 Corchorus olitorius cultivar O-4 contig22681, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19442

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2632--2666
15
2.3
15
95
0
61
37
17
31
14
1.89
4173--4225
12
4.4
13
81
11
60
45
9
5
39
1.60
4623--4686
28
2.3
28
83
2
85
40
14
23
21
1.90
4623--4687
27
2.4
26
77
10
67
40
13
23
23
1.90
5466--5514
16
3.1
15
82
11
53
4
18
0
77
0.92
5451--5531
30
2.8
27
76
14
81
3
23
0
72
1.00
6664--6697
9
3.9
9
88
7
52
0
26
0
73
0.83
14698--14752
21
2.6
21
88
0
74
16
45
23
14
1.84
15104--15133
15
2.1
14
93
6
51
13
16
6
63
1.50
19408--19437
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!