Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022649.1 Corchorus olitorius cultivar O-4 contig22682, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32730

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1213--1242
13
2.3
13
94
0
51
33
16
10
40
1.82
2481--3462
218
4.5
218
89
1
1493
35
7
21
34
1.83
3948--5685
211
8.0
218
88
3
2341
36
20
7
35
1.82
3948--5685
440
4.0
439
88
3
2491
36
20
7
35
1.82
12879--12912
2
17.0
2
100
0
68
50
0
0
50
1.00
13431--13494
32
1.9
34
84
6
87
14
14
1
70
1.25
13876--13929
28
1.9
28
84
0
72
40
7
7
44
1.60
14733--14775
13
3.3
13
78
9
52
74
0
18
6
1.04
17055--17109
27
2.0
27
89
0
83
29
20
14
36
1.92
20198--20232
1
35.0
1
100
0
70
0
0
0
100
0.00
31600--31636
6
6.2
6
87
0
56
13
18
2
64
1.39
31701--31735
6
5.8
6
89
0
52
22
34
8
34
1.85
31701--31735
18
1.9
18
100
0
70
22
34
8
34
1.85

Tables:   1

The End!