Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022653.1 Corchorus olitorius cultivar O-4 contig22686, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8651

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2206--2264
30
2.1
27
84
12
75
47
11
0
40
1.40
2407--2452
2
23.0
2
86
8
67
52
0
2
45
1.13
2407--2454
19
2.4
20
86
10
71
50
0
4
45
1.21
6751--6795
15
2.9
16
83
9
58
73
0
17
8
1.08
6751--6795
8
5.9
8
84
10
58
73
0
17
8
1.08
7073--7115
21
2.0
21
95
0
77
25
9
6
58
1.54
7214--7296
41
2.0
41
95
0
148
34
14
6
44
1.70
7518--7638
16
7.6
16
70
15
90
7
14
38
39
1.75
7548--7628
32
2.5
32
89
0
126
9
14
35
39
1.80
7782--7828
13
3.8
12
78
13
51
55
4
0
40
1.19
8383--8408
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!