Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022665.1 Corchorus olitorius cultivar O-4 contig22698, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5513

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43--106
31
2.1
31
88
8
96
34
15
10
39
1.83
250--319
29
2.3
30
85
9
90
45
14
18
21
1.84
1141--1203
26
2.4
26
86
0
90
31
17
7
42
1.78
2508--2552
21
2.1
21
88
8
65
26
6
17
48
1.72
2618--2661
22
2.0
22
82
8
54
6
29
18
45
1.75
4566--4616
19
2.8
17
77
13
57
82
7
9
0
0.85

Tables:   1

The End!