Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022674.1 Corchorus olitorius cultivar O-4 contig22707, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10854

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
90--400
40
7.7
39
75
7
291
35
25
26
13
1.92
78--400
81
4.0
81
93
0
522
35
24
26
13
1.92
417--654
50
4.8
50
88
5
328
33
15
28
21
1.94
417--661
100
2.5
99
89
4
372
34
15
28
21
1.94
1346--1391
19
2.3
20
82
14
60
34
15
6
43
1.72
1346--1476
51
2.6
50
82
10
153
37
16
3
41
1.67
1405--1442
19
2.0
20
89
5
60
36
13
0
50
1.42
1419--1491
30
2.4
30
73
8
76
41
15
1
42
1.55

Tables:   1

The End!