Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022683.1 Corchorus olitorius cultivar O-4 contig22716, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19036

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2852--2910
12
4.8
12
95
2
100
61
16
13
8
1.56
3083--3115
2
16.5
2
100
0
66
51
0
0
48
1.00
3311--3338
12
2.3
12
100
0
56
42
7
0
50
1.30
3527--3635
53
2.1
53
94
0
191
49
16
7
26
1.72
4187--4226
13
3.1
13
85
0
53
25
15
15
45
1.84
9907--9986
29
2.7
30
86
3
99
28
17
12
41
1.86
10306--10388
31
2.7
31
98
0
157
30
15
12
42
1.83
10530--10609
29
2.7
29
88
3
106
40
12
20
27
1.88
15282--15355
29
2.6
29
95
0
139
43
39
8
9
1.67
18288--18325
15
2.4
16
91
4
60
71
13
2
13
1.26

Tables:   1

The End!