Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022693.1 Corchorus olitorius cultivar O-4 contig22726, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10886

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1075--1194
41
3.0
40
74
15
111
51
15
10
21
1.74
2939--3041
27
3.8
27
85
1
116
34
25
20
19
1.96
4941--4984
21
2.1
21
95
0
79
50
15
0
34
1.45
8924--8978
21
2.6
21
88
0
74
16
49
21
12
1.79
9330--9363
16
2.2
16
89
5
52
14
17
5
61
1.52
9331--9363
15
2.1
17
88
11
52
12
18
6
63
1.48
9551--9604
26
2.1
26
100
0
108
42
18
11
27
1.84

Tables:   1

The End!