Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022703.1 Corchorus olitorius cultivar O-4 contig22736, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12396

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
951--992
15
2.7
15
92
3
66
11
9
14
64
1.50
6519--6568
21
2.4
21
89
0
73
12
24
48
16
1.79
7605--7654
21
2.4
21
86
0
64
12
24
46
18
1.82
7867--7906
21
1.9
21
84
0
53
27
17
50
5
1.67
9293--9438
32
4.5
32
90
3
213
26
16
26
31
1.96
10955--10989
17
2.1
17
94
0
61
54
17
8
20
1.68
11597--11622
13
2.0
13
100
0
52
76
0
0
23
0.78
11789--11890
27
3.8
27
98
0
195
19
19
42
18
1.90

Tables:   1

The End!