Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022705.1 Corchorus olitorius cultivar O-4 contig22738, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22843

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1961--2016
11
4.8
11
80
10
67
50
8
5
35
1.57
1965--2016
13
4.4
13
77
15
51
46
9
5
38
1.61
1961--2016
24
2.4
23
84
3
76
50
8
5
35
1.57
3221--3288
14
5.1
14
77
10
63
1
19
0
79
0.81
3224--3271
24
2.0
24
83
0
60
2
18
0
79
0.84
3224--3283
25
2.6
22
77
15
59
1
20
0
78
0.84
4345--4458
58
2.0
57
87
1
165
32
19
14
34
1.91
5910--5944
2
17.5
2
100
0
70
48
0
0
51
1.00
8950--8976
1
27.0
1
100
0
54
0
0
0
100
0.00
16732--16778
12
3.9
12
94
0
85
51
34
14
0
1.43
18610--18663
29
1.9
28
85
7
74
46
11
11
31
1.74

Tables:   1

The End!