Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: AWUE01022713.1 Corchorus olitorius cultivar O-4 contig22746, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 71790
ACGTcount: A:0.31, C:0.19, G:0.18, T:0.32
Found at i:8 original size:2 final size:2
Alignment explanation
Indices: 2--37 Score: 72
Period size: 2 Copynumber: 18.0 Consensus size: 2
1 G
2 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
38 ATAAAGATAA
Statistics
Matches: 34, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 34 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
TA
Found at i:1246 original size:28 final size:28
Alignment explanation
Indices: 1206--1262 Score: 114
Period size: 28 Copynumber: 2.0 Consensus size: 28
1196 TAAATCTGCC
1206 AAGGATCAAATCCTAATTATTGAAATTA
1 AAGGATCAAATCCTAATTATTGAAATTA
1234 AAGGATCAAATCCTAATTATTGAAATTA
1 AAGGATCAAATCCTAATTATTGAAATTA
1262 A
1 A
1263 TTAAGAGCTC
Statistics
Matches: 29, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
28 29 1.00
ACGTcount: A:0.47, C:0.11, G:0.11, T:0.32
Consensus pattern (28 bp):
AAGGATCAAATCCTAATTATTGAAATTA
Found at i:3642 original size:29 final size:31
Alignment explanation
Indices: 3593--3668 Score: 102
Period size: 29 Copynumber: 2.5 Consensus size: 31
3583 TGACACCAAA
3593 TTGTAAGTAGAGGGACAAAATTGA-CAGTTT
1 TTGTAAGTAGAGGGACAAAATTGATCAGTTT
* * **
3623 TTGT-AGTAGGGGGACCAAATTGATCCTTTT
1 TTGTAAGTAGAGGGACAAAATTGATCAGTTT
3653 TTGTAAGTAGAGGGAC
1 TTGTAAGTAGAGGGAC
3669 TTGTACGGTA
Statistics
Matches: 39, Mismatches: 5, Indels: 3
0.83 0.11 0.06
Matches are distributed among these distances:
29 17 0.44
30 12 0.31
31 10 0.26
ACGTcount: A:0.30, C:0.09, G:0.29, T:0.32
Consensus pattern (31 bp):
TTGTAAGTAGAGGGACAAAATTGATCAGTTT
Found at i:4155 original size:3 final size:3
Alignment explanation
Indices: 4147--4192 Score: 92
Period size: 3 Copynumber: 15.3 Consensus size: 3
4137 AATACTTCTT
4147 TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA T
1 TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA T
4193 ATATATAGGG
Statistics
Matches: 43, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
3 43 1.00
ACGTcount: A:0.33, C:0.00, G:0.00, T:0.67
Consensus pattern (3 bp):
TTA
Found at i:4905 original size:22 final size:22
Alignment explanation
Indices: 4880--4921 Score: 59
Period size: 22 Copynumber: 1.9 Consensus size: 22
4870 TTTATATTTA
4880 TAATTA-AGTATTAAGTGTGTTT
1 TAATTACA-TATTAAGTGTGTTT
*
4902 TAATTACATATTAATTGTGT
1 TAATTACATATTAAGTGTGT
4922 GTGCATATTA
Statistics
Matches: 18, Mismatches: 1, Indels: 2
0.86 0.05 0.10
Matches are distributed among these distances:
22 17 0.94
23 1 0.06
ACGTcount: A:0.33, C:0.02, G:0.14, T:0.50
Consensus pattern (22 bp):
TAATTACATATTAAGTGTGTTT
Found at i:7235 original size:75 final size:75
Alignment explanation
Indices: 7148--7300 Score: 306
Period size: 75 Copynumber: 2.0 Consensus size: 75
7138 TCCTTAATTG
7148 CAAAAAATGCAAAAGTTACTTCTGAGCTCGGAATAAGCTAAAATTTGGACAGTGTGTTCATCATC
1 CAAAAAATGCAAAAGTTACTTCTGAGCTCGGAATAAGCTAAAATTTGGACAGTGTGTTCATCATC
7213 ATATTCTAAA
66 ATATTCTAAA
7223 CAAAAAATGCAAAAGTTACTTCTGAGCTCGGAATAAGCTAAAATTTGGACAGTGTGTTCATCATC
1 CAAAAAATGCAAAAGTTACTTCTGAGCTCGGAATAAGCTAAAATTTGGACAGTGTGTTCATCATC
7288 ATATTCTAAA
66 ATATTCTAAA
7298 CAA
1 CAA
7301 CTTTTATAAA
Statistics
Matches: 78, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
75 78 1.00
ACGTcount: A:0.39, C:0.16, G:0.16, T:0.29
Consensus pattern (75 bp):
CAAAAAATGCAAAAGTTACTTCTGAGCTCGGAATAAGCTAAAATTTGGACAGTGTGTTCATCATC
ATATTCTAAA
Found at i:8865 original size:15 final size:14
Alignment explanation
Indices: 8844--8893 Score: 64
Period size: 15 Copynumber: 3.4 Consensus size: 14
8834 TAGTAAACAC
8844 TTTCGGTGCCATCA
1 TTTCGGTGCCATCA
*
8858 TCTTCGGTGCCGTCGA
1 T-TTCGGTGCCATC-A
8874 TTTCGGTGCCATCAA
1 TTTCGGTGCCATC-A
8889 TTTCG
1 TTTCG
8894 TCCATGACAT
Statistics
Matches: 31, Mismatches: 3, Indels: 3
0.84 0.08 0.08
Matches are distributed among these distances:
14 1 0.03
15 28 0.90
16 2 0.06
ACGTcount: A:0.12, C:0.28, G:0.24, T:0.36
Consensus pattern (14 bp):
TTTCGGTGCCATCA
Found at i:10163 original size:18 final size:18
Alignment explanation
Indices: 10095--10165 Score: 54
Period size: 18 Copynumber: 3.9 Consensus size: 18
10085 TTGTTGAACA
*
10095 AGTGTGGCCACTTGGTGC
1 AGTGCGGCCACTTGGTGC
* * **
10113 GGTGCGACCA-TATGGTAT
1 AGTGCGGCCACT-TGGTGC
* * *
10131 GGTGCGGCTATTTGGTGC
1 AGTGCGGCCACTTGGTGC
10149 AGTGCGGCCACTTGGTG
1 AGTGCGGCCACTTGGTG
10166 TGGCGCCATT
Statistics
Matches: 39, Mismatches: 12, Indels: 4
0.71 0.22 0.07
Matches are distributed among these distances:
17 1 0.03
18 37 0.95
19 1 0.03
ACGTcount: A:0.13, C:0.20, G:0.39, T:0.28
Consensus pattern (18 bp):
AGTGCGGCCACTTGGTGC
Found at i:17616 original size:64 final size:64
Alignment explanation
Indices: 17515--17634 Score: 213
Period size: 64 Copynumber: 1.9 Consensus size: 64
17505 TCAAGGAGAG
* *
17515 CTTGACATCTAGCATGGGTGAGTCCCTCTCCTTTTGACACATAGCAAGTCCAAAGCCCTCTCCT
1 CTTGACACCTAGCATGGGTGAGTCCCTCTCCTTTTGACACATAACAAGTCCAAAGCCCTCTCCT
*
17579 CTTGACACCTAGCATGGGTGAGTCCCTCTCCTTTTGACACCTAACAAGTCCAAAGC
1 CTTGACACCTAGCATGGGTGAGTCCCTCTCCTTTTGACACATAACAAGTCCAAAGC
17635 TTAGGATTTA
Statistics
Matches: 53, Mismatches: 3, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
64 53 1.00
ACGTcount: A:0.23, C:0.33, G:0.17, T:0.27
Consensus pattern (64 bp):
CTTGACACCTAGCATGGGTGAGTCCCTCTCCTTTTGACACATAACAAGTCCAAAGCCCTCTCCT
Found at i:17619 original size:32 final size:32
Alignment explanation
Indices: 17516--17621 Score: 124
Period size: 32 Copynumber: 3.3 Consensus size: 32
17506 CAAGGAGAGC
*
17516 TTGACATCTAGCATGGGTGAGTCCCTCTCCTT
1 TTGACACCTAGCATGGGTGAGTCCCTCTCCTT
* * **** *
17548 TTGACACATAGCAAGTCCAAAG-CCCTCTCCTC
1 TTGACACCTAGCATG-GGTGAGTCCCTCTCCTT
17580 TTGACACCTAGCATGGGTGAGTCCCTCTCCTT
1 TTGACACCTAGCATGGGTGAGTCCCTCTCCTT
17612 TTGACACCTA
1 TTGACACCTA
17622 ACAAGTCCAA
Statistics
Matches: 57, Mismatches: 15, Indels: 4
0.75 0.20 0.05
Matches are distributed among these distances:
31 2 0.04
32 53 0.93
33 2 0.04
ACGTcount: A:0.21, C:0.32, G:0.18, T:0.29
Consensus pattern (32 bp):
TTGACACCTAGCATGGGTGAGTCCCTCTCCTT
Found at i:17959 original size:24 final size:24
Alignment explanation
Indices: 17940--17998 Score: 93
Period size: 24 Copynumber: 2.5 Consensus size: 24
17930 GGTTAATTTC
*
17940 ATTTGGTCATT-GAGTATTAACTTG
1 ATTTGTTCATTGGA-TATTAACTTG
17964 ATTTGTTCATTGGATATTAACTTG
1 ATTTGTTCATTGGATATTAACTTG
17988 ATTTGTTCATT
1 ATTTGTTCATT
17999 TAGTTGGATT
Statistics
Matches: 33, Mismatches: 1, Indels: 2
0.92 0.03 0.06
Matches are distributed among these distances:
24 31 0.94
25 2 0.06
ACGTcount: A:0.24, C:0.08, G:0.17, T:0.51
Consensus pattern (24 bp):
ATTTGTTCATTGGATATTAACTTG
Found at i:34845 original size:25 final size:21
Alignment explanation
Indices: 34798--34838 Score: 73
Period size: 21 Copynumber: 2.0 Consensus size: 21
34788 GAGATTACTC
34798 TTCTTGGTTAGAGGGAGAATG
1 TTCTTGGTTAGAGGGAGAATG
*
34819 TTCTTGGTTCGAGGGAGAAT
1 TTCTTGGTTAGAGGGAGAAT
34839 ATGTGTTTTT
Statistics
Matches: 19, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
21 19 1.00
ACGTcount: A:0.22, C:0.07, G:0.37, T:0.34
Consensus pattern (21 bp):
TTCTTGGTTAGAGGGAGAATG
Found at i:37338 original size:31 final size:31
Alignment explanation
Indices: 37297--37393 Score: 160
Period size: 31 Copynumber: 3.1 Consensus size: 31
37287 AAATAAATAG
*
37297 ATAAAGCAATGATCCTAAACCAGGATTGAGAA
1 ATAAA-CAATGATCCTAAACTAGGATTGAGAA
*
37329 ATAAACAATGATCTTAAACTAGGATTGAGAA
1 ATAAACAATGATCCTAAACTAGGATTGAGAA
37360 ATAAACAATGATCCTAAACTAGGATTGA-AA
1 ATAAACAATGATCCTAAACTAGGATTGAGAA
37390 ATAA
1 ATAA
37394 GCTTATAAAG
Statistics
Matches: 62, Mismatches: 3, Indels: 2
0.93 0.04 0.03
Matches are distributed among these distances:
30 6 0.10
31 51 0.82
32 5 0.08
ACGTcount: A:0.49, C:0.12, G:0.15, T:0.23
Consensus pattern (31 bp):
ATAAACAATGATCCTAAACTAGGATTGAGAA
Found at i:37413 original size:39 final size:39
Alignment explanation
Indices: 37360--37478 Score: 147
Period size: 38 Copynumber: 3.1 Consensus size: 39
37350 GGATTGAGAA
* **
37360 ATAAA-CAATGATCCTAAACTAGGATTGAAAA-TAAGCTT
1 ATAAAGCAATGATCCTAAACCAGGATTGAAAATTAA-CCG
*
37398 ATAAAGCAATGATCCTAAACCAGGA-TCAAAATTAACCG
1 ATAAAGCAATGATCCTAAACCAGGATTGAAAATTAACCG
* *
37436 ATAAAGCAATGATCCTAAACCAGGATCG-AAATTAACCA
1 ATAAAGCAATGATCCTAAACCAGGATTGAAAATTAACCG
37474 ATAAA
1 ATAAA
37479 ATAGAATATA
Statistics
Matches: 71, Mismatches: 7, Indels: 6
0.85 0.08 0.07
Matches are distributed among these distances:
38 50 0.70
39 21 0.30
ACGTcount: A:0.49, C:0.18, G:0.13, T:0.21
Consensus pattern (39 bp):
ATAAAGCAATGATCCTAAACCAGGATTGAAAATTAACCG
Found at i:38039 original size:170 final size:169
Alignment explanation
Indices: 37581--38137 Score: 805
Period size: 169 Copynumber: 3.3 Consensus size: 169
37571 ACCAAGGATT
* * * * *
37581 TTAAACATGAATTTTTGATGAAAAACTTAATGAAATCAAATAATA-CTGGGAAGTTTTACCGATT
1 TTAAACATGAATCTTTGATGAAAAACTTAATGAAATGAAATGATACCT-GGAGGTTTTACTGATT
* * *
37645 GCCCGGAGGACTTATTAGGAA-TAATACCCGGATGTTTCTGATTTTGTGCCCGGAGGACTCACCA
65 GCCCGGAGGACTTATTA-GAATTAATACCCGGAGGTTTCTGAATTTGTGCCCGGAGGACTTACCA
* *
37709 ATGTAAACTCTAAATAAAGACCTTGACCAAGGATTTTAAAC
129 ATGTAAACTCTGAATAGAGACCTTGACCAAGGATTTTAAAC
* * * *
37750 TTAAACATGAATCTTTAATGAAGAACTTAATGAAATGAAATGGTACCCGGAGGTTTTACTGATTG
1 TTAAACATGAATCTTTGATGAAAAACTTAATGAAATGAAATGATACCTGGAGGTTTTACTGATTG
* *
37815 CCCGAAGGACTTATCAGAATTAATACCCGGAGGTTTCTGAATTTGTGCCCGGAGGACTTACCAAT
66 CCCGGAGGACTTATTAGAATTAATACCCGGAGGTTTCTGAATTTGTGCCCGGAGGACTTACCAAT
37880 GTAAACTCTGAATAGAGACCTTGACCAAGGATTTTAAAC
131 GTAAACTCTGAATAGAGACCTTGACCAAGGATTTTAAAC
* * * *
37919 TCAAACATGAATCTTTGATGAAAAATTTTGATGAAATGACATGATACCTGGAGGTTTTACTGATT
1 TTAAACATGAATCTTTGATGAAAAA-CTTAATGAAATGAAATGATACCTGGAGGTTTTACTGATT
* * * *
37984 GTCCGGAGGACTTATTATAATTAATACCCGAAGGTTTCTAAATTTGTGCCCGGAGGACTTACCAA
65 GCCCGGAGGACTTATTAGAATTAATACCCGGAGGTTTCTGAATTTGTGCCCGGAGGACTTACCAA
* *
38049 TGTAAACTCTGAATAGAGACCTTAACCAAGGATTTTAAAT
130 TGTAAACTCTGAATAGAGACCTTGACCAAGGATTTTAAAC
* *
38089 TTAAACATGAATTTTTGAT-AAAAAGCTTGATGAAATGAAATGATACCTG
1 TTAAACATGAATCTTTGATGAAAAA-CTTAATGAAATGAAATGATACCTG
38138 TATTGAAACT
Statistics
Matches: 348, Mismatches: 37, Indels: 6
0.89 0.09 0.02
Matches are distributed among these distances:
168 3 0.01
169 196 0.56
170 149 0.43
ACGTcount: A:0.35, C:0.16, G:0.19, T:0.30
Consensus pattern (169 bp):
TTAAACATGAATCTTTGATGAAAAACTTAATGAAATGAAATGATACCTGGAGGTTTTACTGATTG
CCCGGAGGACTTATTAGAATTAATACCCGGAGGTTTCTGAATTTGTGCCCGGAGGACTTACCAAT
GTAAACTCTGAATAGAGACCTTGACCAAGGATTTTAAAC
Found at i:38389 original size:69 final size:69
Alignment explanation
Indices: 38241--38390 Score: 178
Period size: 69 Copynumber: 2.2 Consensus size: 69
38231 TTAAACTTGG
* ** *
38241 CTTATGGAAAAGCCCTTGTCGTATGGATGGAACCAATGCTTAAATTGTCTCGTATGGAAACGAAT
1 CTTATGGAAAAGCCCTTGTCGTATGGATGGAACCAAGGCTTAAACCGGCTCGTATGGAAACGAAT
*
38306 TTGC
66 TTGA
* * * *
38310 CTTGTAGAAAAG-CCTATGTGGCT-TGGATGGCACCAAGGCTTAAACCGGCTCGTATGGAAACGA
1 CTTATGGAAAAGCCCT-TGTCG-TATGGATGGAACCAAGGCTTAAACCGGCTCGTATGGAAACGA
*
38373 GTTTGA
64 ATTTGA
38379 CTTATGGAAAAG
1 CTTATGGAAAAG
38391 TCAAGCATTC
Statistics
Matches: 67, Mismatches: 12, Indels: 4
0.81 0.14 0.05
Matches are distributed among these distances:
68 3 0.04
69 63 0.94
70 1 0.01
ACGTcount: A:0.29, C:0.17, G:0.26, T:0.27
Consensus pattern (69 bp):
CTTATGGAAAAGCCCTTGTCGTATGGATGGAACCAAGGCTTAAACCGGCTCGTATGGAAACGAAT
TTGA
Found at i:40292 original size:14 final size:13
Alignment explanation
Indices: 40275--40323 Score: 71
Period size: 13 Copynumber: 3.7 Consensus size: 13
40265 CCGAATTTCC
40275 GAAAACCATTTTTT
1 GAAAACCA-TTTTT
*
40289 GAAAAACATTTTT
1 GAAAACCATTTTT
*
40302 GAAAAGCATTTTT
1 GAAAACCATTTTT
40315 GAAAACCAT
1 GAAAACCAT
40324 GACTCTTTTT
Statistics
Matches: 32, Mismatches: 3, Indels: 1
0.89 0.08 0.03
Matches are distributed among these distances:
13 25 0.78
14 7 0.22
ACGTcount: A:0.43, C:0.12, G:0.10, T:0.35
Consensus pattern (13 bp):
GAAAACCATTTTT
Found at i:40406 original size:13 final size:12
Alignment explanation
Indices: 40381--40435 Score: 55
Period size: 10 Copynumber: 4.9 Consensus size: 12
40371 TGCCTTTATT
40381 TTCATTTTTTTC
1 TTCATTTTTTTC
*
40393 AT--TTTTTTTC
1 TTCATTTTTTTC
*
40403 TTCATTCTTTTC
1 TTCATTTTTTTC
*
40415 TTCA-CTTTTT-
1 TTCATTTTTTTC
40425 TTCATTTTTTT
1 TTCATTTTTTT
40436 ATGGGAGTTT
Statistics
Matches: 34, Mismatches: 6, Indels: 7
0.72 0.13 0.15
Matches are distributed among these distances:
10 13 0.38
11 9 0.26
12 12 0.35
ACGTcount: A:0.09, C:0.16, G:0.00, T:0.75
Consensus pattern (12 bp):
TTCATTTTTTTC
Found at i:40407 original size:22 final size:21
Alignment explanation
Indices: 40374--40435 Score: 63
Period size: 22 Copynumber: 2.8 Consensus size: 21
40364 TTCCAAGTGC
40374 CTTTATTTTCATTTTTTTCATT-
1 CTTT-TTTTCATTTTTTTC-TTA
* *
40396 TTTTTTCTTCATTCTTTTCTTCA
1 CTTTTT-TTCATTTTTTTCTT-A
40419 CTTTTTTTCATTTTTTT
1 CTTTTTTTCATTTTTTT
40436 ATGGGAGTTT
Statistics
Matches: 33, Mismatches: 4, Indels: 6
0.77 0.09 0.14
Matches are distributed among these distances:
21 4 0.12
22 24 0.73
23 5 0.15
ACGTcount: A:0.10, C:0.16, G:0.00, T:0.74
Consensus pattern (21 bp):
CTTTTTTTCATTTTTTTCTTA
Found at i:46455 original size:19 final size:19
Alignment explanation
Indices: 46431--46469 Score: 78
Period size: 19 Copynumber: 2.1 Consensus size: 19
46421 CTAACCAAGC
46431 CTAAAACTCCTCAAATCGA
1 CTAAAACTCCTCAAATCGA
46450 CTAAAACTCCTCAAATCGA
1 CTAAAACTCCTCAAATCGA
46469 C
1 C
46470 CCTCAACCGC
Statistics
Matches: 20, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
19 20 1.00
ACGTcount: A:0.41, C:0.33, G:0.05, T:0.21
Consensus pattern (19 bp):
CTAAAACTCCTCAAATCGA
Found at i:46886 original size:21 final size:21
Alignment explanation
Indices: 46862--46902 Score: 64
Period size: 21 Copynumber: 2.0 Consensus size: 21
46852 AAGATTAGTC
46862 TTCTTGGTTAGAAGGAGAATG
1 TTCTTGGTTAGAAGGAGAATG
* *
46883 TTCTTGGTTCGAGGGAGAAT
1 TTCTTGGTTAGAAGGAGAAT
46903 ATGTGTTTTT
Statistics
Matches: 18, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
21 18 1.00
ACGTcount: A:0.24, C:0.07, G:0.34, T:0.34
Consensus pattern (21 bp):
TTCTTGGTTAGAAGGAGAATG
Found at i:52129 original size:27 final size:27
Alignment explanation
Indices: 52097--52168 Score: 101
Period size: 26 Copynumber: 2.7 Consensus size: 27
52087 AGTGAACTTG
52097 AAATGACCAAAATGCCCCTGAATATGC
1 AAATGACCAAAATGCCCCTGAATATGC
* * *
52124 AGATGACCAAAATG-CCCTGGATGTGC
1 AAATGACCAAAATGCCCCTGAATATGC
*
52150 AAATGACTAAAATGCCCCT
1 AAATGACCAAAATGCCCCT
52169 AGATGACCCT
Statistics
Matches: 39, Mismatches: 5, Indels: 2
0.85 0.11 0.04
Matches are distributed among these distances:
26 22 0.56
27 17 0.44
ACGTcount: A:0.38, C:0.25, G:0.18, T:0.19
Consensus pattern (27 bp):
AAATGACCAAAATGCCCCTGAATATGC
Found at i:60818 original size:4 final size:4
Alignment explanation
Indices: 60801--60887 Score: 165
Period size: 4 Copynumber: 21.8 Consensus size: 4
60791 TAATTTGTTT
*
60801 ATAC ATAC ACAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
60849 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATA
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATA
60888 TATGTGTGTG
Statistics
Matches: 81, Mismatches: 2, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
4 81 1.00
ACGTcount: A:0.51, C:0.25, G:0.00, T:0.24
Consensus pattern (4 bp):
ATAC
Done.