Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022717.1 Corchorus olitorius cultivar O-4 contig22750, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36648

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2681--2727
24
2.0
24
95
4
87
31
4
25
38
1.75
2816--2888
30
2.4
30
100
0
146
39
26
13
20
1.90
18504--18529
13
2.0
13
100
0
52
46
0
46
7
1.31
24165--24244
29
2.7
29
88
3
106
40
12
18
28
1.87
27122--27201
40
2.0
41
90
2
126
22
8
21
47
1.78
29071--29269
30
6.8
30
87
4
275
35
23
20
20
1.96
29067--29269
88
2.3
88
100
0
406
35
23
21
19
1.96
29071--29269
58
3.4
59
85
5
253
35
23
20
20
1.96
29535--29790
50
5.0
50
95
1
440
26
26
11
35
1.90
29535--29790
52
5.0
51
94
2
444
26
26
11
35
1.90

Tables:   1

The End!