Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022724.1 Corchorus olitorius cultivar O-4 contig22757, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51428

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
141--177
1
37.0
1
100
0
74
100
0
0
0
0.00
4845--4921
28
2.7
29
91
4
129
22
29
7
40
1.82
5645--5789
55
2.6
57
87
7
201
30
13
13
42
1.82
5983--6353
74
5.0
74
94
0
638
35
17
17
30
1.93
6419--6449
2
15.5
2
100
0
62
48
0
0
51
1.00
6730--6763
12
2.8
12
81
0
50
41
29
17
11
1.85
7025--7049
6
4.2
6
100
0
50
20
32
32
16
1.94
7053--7104
20
2.6
21
78
9
63
42
0
5
51
1.25
9458--9758
149
2.0
149
100
0
602
39
18
11
30
1.86
18127--18247
60
2.0
60
93
0
206
28
21
19
31
1.97
29437--29515
39
2.0
39
87
0
113
32
20
13
32
1.92
29703--29774
29
2.4
29
79
4
81
48
11
15
25
1.77
38846--38944
49
2.0
49
88
3
146
55
6
7
31
1.51
44709--44782
28
2.6
29
86
4
105
18
17
28
35
1.94
45137--45186
22
2.3
22
92
0
82
14
18
18
50
1.79
46309--46333
10
2.5
10
100
0
50
32
52
0
16
1.44
47796--47825
12
2.4
13
94
5
53
76
0
23
0
0.78
51046--51090
17
2.5
19
78
10
58
13
8
0
77
0.98
51209--51355
35
4.2
35
90
0
231
10
33
42
13
1.78

Tables:   1

The End!