Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022725.1 Corchorus olitorius cultivar O-4 contig22758, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19944

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
569--688
35
3.4
35
90
0
186
10
36
40
11
1.77
627--706
18
4.5
18
70
14
67
6
36
42
15
1.72
4572--4630
29
2.0
29
90
6
91
32
23
18
25
1.97
7834--7863
15
2.1
15
93
6
53
43
0
3
53
1.17
8200--8251
24
2.2
24
89
0
77
34
51
1
11
1.49
11070--11202
56
2.3
58
91
6
209
16
42
3
37
1.64

Tables:   1

The End!