Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022726.1 Corchorus olitorius cultivar O-4 contig22759, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3057

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
118--191
7
10.9
7
76
16
57
2
16
0
81
0.81
127--177
15
3.3
15
80
5
57
0
21
0
78
0.75
118--170
8
6.5
8
81
10
63
0
18
0
81
0.70
737--776
18
2.2
18
90
4
62
15
60
22
2
1.47
2094--3028
41
24.8
39
78
13
699
37
22
15
24
1.93
2164--3028
35
23.1
35
78
13
820
37
22
15
24
1.93
2097--3023
188
4.9
188
90
4
1363
37
22
15
24
1.93

Tables:   1

The End!