Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022727.1 Corchorus olitorius cultivar O-4 contig22760, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33792

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1716--1828
28
3.7
30
83
14
142
35
15
15
33
1.89
1715--1861
67
2.3
63
88
9
212
35
15
17
31
1.91
7372--7397
10
2.6
10
100
0
52
0
0
7
92
0.39
20089--20168
40
2.0
40
97
0
151
40
5
18
36
1.73
23633--23843
75
2.9
74
85
10
292
23
21
19
35
1.96
23809--24039
115
2.1
110
94
4
399
22
21
23
32
1.98
24506--24581
39
1.9
40
86
2
109
26
18
26
28
1.98
24557--24600
14
3.1
14
83
0
52
22
13
27
36
1.92
24721--24803
42
2.0
42
88
4
123
25
15
31
27
1.96
24991--25142
44
3.7
43
73
19
144
25
19
21
33
1.97
24991--25136
78
1.9
78
89
2
231
25
19
20
34
1.96
25129--25189
30
2.0
30
87
6
88
22
27
19
29
1.98
25203--25342
51
2.7
51
88
0
190
27
20
14
38
1.91
25351--25438
31
2.8
32
87
1
124
26
23
17
32
1.96
25609--25746
36
3.8
36
87
0
195
25
25
21
28
1.99
25593--25749
72
2.2
72
92
0
260
24
23
21
29
1.99
25922--26063
46
3.1
46
86
1
185
30
23
13
33
1.93
26547--26648
45
2.3
45
84
3
125
39
20
18
21
1.93
27764--27827
27
2.4
27
89
5
94
32
14
23
29
1.94

Tables:   1

The End!