Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022728.1 Corchorus olitorius cultivar O-4 contig22761, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8698

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1230--1259
15
2.1
15
93
6
53
63
6
16
13
1.50
1655--1709
21
2.6
21
91
0
83
12
21
47
18
1.82
1655--1721
21
3.1
21
86
2
80
14
20
44
19
1.86
4141--4195
24
2.2
25
81
12
69
25
12
7
54
1.63
4265--4333
26
3.0
21
72
22
59
31
11
10
46
1.74
4706--4747
15
2.7
15
96
3
75
66
14
7
11
1.43
6118--6177
30
2.0
31
90
3
95
33
18
11
36
1.87
6130--6178
12
4.7
11
80
16
52
30
20
12
36
1.89

Tables:   1

The End!