Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022735.1 Corchorus olitorius cultivar O-4 contig22768, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16162

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1950--1975
12
2.2
12
100
0
52
57
15
0
26
1.38
2080--2180
36
2.8
36
96
1
186
44
23
11
19
1.84
2818--2953
41
3.3
41
86
6
193
46
15
2
36
1.58
5906--5994
43
2.1
43
97
0
169
30
23
13
32
1.93
11561--11600
2
20.5
2
94
5
73
47
0
0
52
1.00
14474--14506
16
2.1
15
94
5
57
66
12
6
15
1.42

Tables:   1

The End!