Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022739.1 Corchorus olitorius cultivar O-4 contig22772, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46568

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
650--681
2
16.0
2
93
0
55
46
0
0
53
1.00
8354--8427
37
2.0
37
94
0
130
10
29
27
32
1.90
14878--14936
27
2.1
27
84
3
73
38
11
15
33
1.84
19711--19736
11
2.4
11
100
0
52
69
7
15
7
1.35
21516--21548
16
2.1
16
100
0
66
36
6
18
39
1.75
35878--35913
19
1.9
18
88
5
54
27
22
8
41
1.82
41650--41684
14
2.5
14
100
0
70
45
34
5
14
1.68

Tables:   1

The End!