Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022740.1 Corchorus olitorius cultivar O-4 contig22773, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43745

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--37
2
18.5
2
100
0
74
48
0
0
51
1.00
206--234
6
5.0
6
91
8
51
17
34
34
13
1.89
11017--11067
25
2.0
25
100
0
102
33
15
43
7
1.76
12133--12165
17
1.9
17
93
0
57
60
0
0
39
0.97
19262--19291
15
2.1
15
93
6
53
63
6
16
13
1.50
19646--19718
21
3.4
21
80
1
83
12
20
47
19
1.81
22878--22920
21
2.0
22
90
4
70
67
18
4
9
1.36
27096--27541
223
2.0
223
99
0
883
43
15
11
28
1.82
42456--42656
100
2.0
100
100
0
402
31
13
28
25
1.94
42658--42707
21
2.4
21
86
6
66
6
30
40
24
1.79

Tables:   1

The End!