Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022746.1 Corchorus olitorius cultivar O-4 contig22779, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1250

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
900--971
16
4.6
16
80
14
87
5
13
41
38
1.68
900--971
32
2.3
31
88
11
103
5
13
41
38
1.68
961--1043
6
14.3
6
81
12
102
1
19
49
30
1.56
985--1043
17
3.4
18
93
6
104
0
20
50
28
1.48
961--1041
23
3.5
23
91
0
126
1
19
50
28
1.55
1156--1189
8
4.4
8
96
3
61
61
0
0
38
0.96
1155--1192
13
3.0
13
88
11
53
60
0
0
39
0.97

Tables:   1

The End!