Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022757.1 Corchorus olitorius cultivar O-4 contig22790, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33224

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1396--1453
22
2.6
23
67
13
57
50
12
20
17
1.78
7211--7257
20
2.3
22
75
17
55
51
6
8
34
1.58
7676--7721
21
2.2
21
88
7
67
63
8
2
26
1.35
18237--18294
30
1.9
30
86
6
82
34
17
10
37
1.84
18712--18741
15
2.0
15
93
0
51
43
20
13
23
1.86
23332--23357
9
2.9
9
100
0
52
34
7
34
23
1.83
23463--23614
76
2.0
76
82
5
182
25
28
28
17
1.98
31097--31130
17
2.0
17
100
0
68
47
23
5
23
1.73
32180--32215
3
12.0
3
100
0
72
66
0
0
33
0.92
32763--32931
77
2.2
77
98
0
329
27
27
20
24
1.99
33044--33082
20
2.0
20
84
0
51
64
7
12
15
1.49
33018--33199
68
2.7
68
83
1
222
45
18
23
13
1.84

Tables:   1

The End!