Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022762.1 Corchorus olitorius cultivar O-4 contig22795, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42246

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5631--5687
29
1.9
30
89
3
89
33
10
22
33
1.88
8121--8160
3
12.7
3
94
5
62
32
0
0
67
0.91
8109--8151
17
2.5
17
84
0
50
30
4
0
65
1.13
12103--12165
3
21.0
3
100
0
126
33
0
0
66
0.92
16357--16385
5
6.0
5
92
8
51
41
0
0
58
0.98
33036--33060
2
12.5
2
100
0
50
52
0
0
48
1.00
34378--34402
13
1.9
13
100
0
50
60
8
0
32
1.26
40781--41224
165
2.7
165
90
2
674
34
10
10
45
1.73
41241--41516
140
2.0
140
83
2
356
32
10
10
45
1.74
41241--41524
142
2.0
140
83
2
354
33
10
10
45
1.74

Tables:   1

The End!