Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022765.1 Corchorus olitorius cultivar O-4 contig22798, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52896

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1359--1388
11
2.7
11
89
0
51
0
26
0
73
0.84
3617--3758
65
2.1
67
87
5
207
35
23
11
28
1.90
7519--7568
23
2.2
23
85
7
66
20
2
12
66
1.34
7518--7568
24
2.2
24
79
13
61
19
1
11
66
1.33
8181--8209
14
2.0
15
93
6
51
62
10
0
27
1.28
8251--8491
49
5.1
49
67
16
155
23
26
19
29
1.98
8212--8492
92
3.0
91
84
4
348
24
27
18
29
1.98
8215--8500
97
3.0
94
83
5
346
23
26
19
30
1.98
8508--8821
47
6.7
47
88
0
423
20
27
17
34
1.95
12490--12553
27
2.4
27
97
0
119
21
43
20
14
1.87
12613--12708
15
6.0
15
74
13
84
40
27
12
19
1.88
12614--12713
33
3.0
33
95
0
173
39
29
12
20
1.88
29309--29345
18
2.1
18
100
0
74
32
37
5
24
1.78
46646--46705
30
2.0
30
100
0
120
26
16
20
36
1.93
52168--52213
18
2.6
18
78
0
56
52
2
0
45
1.13

Tables:   1

The End!