Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022769.1 Corchorus olitorius cultivar O-4 contig22802, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11731

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5131--5208
27
2.9
27
90
3
113
41
24
15
19
1.90
5651--6052
30
14.0
30
83
8
496
44
17
15
22
1.86
5759--5798
20
2.0
20
90
0
62
37
25
15
22
1.93
6012--6085
38
1.9
38
83
0
94
48
17
16
17
1.81
6175--6576
168
2.4
168
87
4
569
34
16
19
29
1.94
6476--6717
103
2.4
102
90
0
367
41
14
16
27
1.87
6807--6981
69
2.5
69
94
1
298
29
14
29
27
1.95
8266--8298
7
4.6
7
96
3
57
15
12
0
72
1.12
8602--8650
11
4.5
11
79
5
55
6
0
8
85
0.73
8599--8661
31
2.0
31
90
6
101
9
0
11
79
0.94
8596--8667
10
7.3
10
77
14
78
8
0
9
81
0.86
8635--8680
18
2.5
18
85
3
56
13
2
10
73
1.17

Tables:   1

The End!