Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022776.1 Corchorus olitorius cultivar O-4 contig22809, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43852

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1258--1304
21
2.2
21
85
7
60
25
40
27
6
1.80
15593--15633
20
2.0
20
95
0
73
29
31
9
29
1.89
17034--17115
41
2.0
41
100
0
164
34
24
14
26
1.94
17475--17549
37
2.0
37
100
0
150
28
16
24
32
1.96
17658--17752
46
2.0
47
97
2
183
40
16
12
30
1.86
30940--30979
10
4.0
10
96
0
71
67
0
32
0
0.91
36944--37023
31
2.6
31
83
0
115
17
23
26
32
1.97
41005--41048
21
2.1
21
100
0
88
45
13
13
27
1.81

Tables:   1

The End!