Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022777.1 Corchorus olitorius cultivar O-4 contig22810, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26438

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
131--157
13
2.1
13
100
0
54
29
29
0
40
1.57
400--1328
334
2.8
338
81
6
926
33
13
16
36
1.88
2460--3342
322
2.7
326
81
8
1021
34
13
15
36
1.87
2769--4714
665
2.9
670
84
6
2294
33
13
15
36
1.88
13310--13390
24
3.4
24
92
0
135
17
24
24
33
1.96
19496--19558
3
20.3
3
93
6
108
65
0
0
34
0.93
20028--20155
43
2.9
44
83
8
170
15
7
26
50
1.69
20005--20152
47
3.2
47
81
11
191
15
7
27
50
1.71
23206--23260
25
2.2
26
83
3
67
49
7
0
43
1.30
23421--23449
13
2.2
13
100
0
58
24
0
20
55
1.44
23741--23849
33
3.3
33
97
0
200
50
5
18
25
1.68
24670--24721
26
1.9
28
84
7
72
19
11
9
59
1.59
24707--24777
22
3.3
21
72
14
63
28
9
8
53
1.63
25184--25349
87
1.9
87
94
0
296
32
12
5
50
1.62

Tables:   1

The End!