Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022782.1 Corchorus olitorius cultivar O-4 contig22815, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68898

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3432--3529
49
2.1
47
86
7
137
22
3
25
48
1.64
3844--3939
31
3.2
31
79
8
92
35
10
17
36
1.84
12688--12849
80
2.0
79
96
1
297
33
17
12
36
1.88
17365--17395
2
15.5
2
100
0
62
51
0
48
0
1.00
22541--22752
111
1.9
111
89
1
327
28
25
6
40
1.80
27700--27756
25
2.4
25
88
5
82
31
5
3
59
1.36
30622--30646
1
25.0
1
100
0
50
0
0
0
100
0.00
40185--40266
42
2.0
42
90
0
128
21
31
29
17
1.96
41148--41282
67
2.0
67
100
0
270
43
16
14
25
1.86
42142--42397
124
2.0
126
90
6
410
48
1
11
38
1.48
57526--57552
13
2.1
13
100
0
54
33
22
22
22
1.97
64155--64409
123
2.0
125
89
7
381
37
10
1
49
1.49
64155--64409
131
2.0
123
90
6
402
37
10
1
49
1.49
64395--64433
14
2.9
13
80
3
51
41
2
2
53
1.28
65828--65861
15
2.3
15
90
10
52
23
14
5
55
1.61

Tables:   1

The End!