Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022816.1 Corchorus olitorius cultivar O-4 contig22849, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20292

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8021--8062
16
2.7
15
92
7
66
71
7
9
11
1.31
11524--11594
28
2.6
27
84
6
99
19
14
21
45
1.85
11761--11808
25
1.9
25
91
0
78
33
20
6
39
1.78
13397--13430
16
2.1
16
89
10
52
14
8
0
76
1.01
15483--15523
5
8.4
5
89
5
66
0
0
21
78
0.76
19668--19720
7
7.6
7
80
14
56
83
0
11
5
0.81
19668--19720
22
2.5
21
84
6
72
83
0
11
5
0.81
19675--19720
13
3.8
12
83
13
58
82
0
13
4
0.81
20084--20132
16
3.0
16
90
3
80
71
6
8
14
1.29
20084--20132
17
2.9
17
87
3
73
71
6
8
14
1.29

Tables:   1

The End!