Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022821.1 Corchorus olitorius cultivar O-4 contig22854, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10454

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2913--2948
19
1.9
18
88
5
54
27
22
8
41
1.82
5332--5444
33
3.4
33
83
2
147
15
33
33
16
1.91
5318--5444
66
1.9
66
87
6
186
16
33
32
17
1.92
5318--5478
66
2.4
66
81
8
168
16
32
33
17
1.92
5521--5561
21
2.0
20
86
9
57
31
0
2
65
1.05
9006--9080
24
3.1
24
86
5
98
56
0
17
26
1.42
8997--9073
24
3.2
24
85
9
95
51
0
15
32
1.44
9317--9348
15
2.1
15
100
0
64
68
6
6
18
1.32

Tables:   1

The End!