Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022824.1 Corchorus olitorius cultivar O-4 contig22857, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14094

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3710--3784
26
2.9
26
86
7
73
45
10
17
26
1.81
4889--4934
11
4.6
10
76
17
51
43
6
21
28
1.77
5956--5991
18
2.0
18
88
0
54
47
2
8
41
1.48
6880--6924
24
1.9
24
86
4
65
31
17
11
40
1.85
9248--9288
16
2.5
17
84
4
57
65
17
0
17
1.27
9304--9576
34
7.7
34
79
10
271
28
16
17
37
1.91
9352--9407
17
3.3
17
65
9
51
26
19
21
32
1.97
10620--10680
25
2.3
26
86
5
79
22
6
3
67
1.29

Tables:   1

The End!