Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022831.1 Corchorus olitorius cultivar O-4 contig22864, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2474

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1997--2030
11
3.1
11
86
0
50
29
17
11
41
1.85
2032--2167
50
2.7
49
82
6
166
28
20
16
34
1.94
2243--2416
38
4.5
39
78
15
141
27
21
16
35
1.95
2279--2455
77
2.3
78
82
6
209
25
22
17
35
1.95
2201--2455
39
6.6
39
75
10
195
25
20
18
35
1.95
2280--2466
38
4.8
38
77
9
132
26
22
17
33
1.96

Tables:   1

The End!