Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022832.1 Corchorus olitorius cultivar O-4 contig22865, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52648

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6743--6815
28
2.6
28
91
0
110
43
27
13
15
1.84
6796--6829
16
2.1
16
88
0
50
52
17
11
17
1.73
7052--7236
50
3.7
50
91
0
262
25
26
12
34
1.92
15960--15999
12
3.4
12
86
6
55
37
7
25
30
1.83
16990--17020
16
1.9
16
100
0
62
25
22
25
25
2.00
23122--23192
28
2.5
28
88
4
99
43
26
14
15
1.85
23176--23209
16
2.1
16
88
0
50
52
17
11
17
1.73
34104--34534
213
2.0
214
91
3
702
38
11
18
31
1.87
39967--40148
37
4.9
39
86
6
238
23
17
33
26
1.96
46290--46393
32
3.2
32
98
0
199
14
28
32
24
1.94
46604--46638
12
2.9
12
86
0
52
80
5
5
8
1.03
47981--48052
25
2.8
25
87
6
99
41
13
5
38
1.68
47993--48052
25
2.3
26
94
2
104
46
16
5
31
1.69
48024--48063
20
2.1
19
90
9
64
37
15
2
45
1.59
50522--50547
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!