Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022841.1 Corchorus olitorius cultivar O-4 contig22874, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8768

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3784--3824
21
1.9
22
90
5
66
24
31
9
34
1.88
5809--5834
6
4.3
6
100
0
52
69
0
15
15
1.20
6242--6282
12
3.4
12
93
0
73
68
17
0
14
1.22
6891--7032
50
2.8
50
89
0
203
32
18
13
35
1.89
7635--7822
50
3.8
49
92
3
304
30
29
13
26
1.94
7881--8038
50
3.1
50
90
3
253
34
11
24
29
1.90
7881--8064
102
1.8
102
85
4
264
36
10
23
28
1.89
8445--8488
21
2.1
21
100
0
88
20
22
18
38
1.93

Tables:   1

The End!