Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022845.1 Corchorus olitorius cultivar O-4 contig22878, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15614

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6423--6705
137
2.1
137
99
0
557
26
38
27
8
1.84
9902--9965
32
2.0
32
100
0
128
28
15
9
46
1.77
9895--9958
32
2.2
28
74
25
71
28
15
9
46
1.77
11466--11494
2
14.5
2
100
0
58
48
0
0
51
1.00
14258--14292
4
8.8
4
87
12
54
22
0
0
77
0.78
14265--14298
13
2.6
13
95
0
59
20
0
0
79
0.73
14262--14298
17
2.2
17
95
0
65
21
0
0
78
0.75
14350--14402
24
2.2
24
83
6
63
3
35
43
16
1.67

Tables:   1

The End!