Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022847.1 Corchorus olitorius cultivar O-4 contig22880, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17413

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8652--8685
16
2.1
16
100
0
68
41
5
0
52
1.25
9021--9273
123
2.0
125
93
1
438
24
18
9
46
1.80
11390--11501
55
2.0
55
87
3
163
25
23
13
38
1.91
11595--11626
2
16.0
2
100
0
64
50
0
0
50
1.00
14617--14755
68
2.1
66
81
10
158
33
15
13
38
1.86
14210--14794
22
26.4
22
69
13
186
36
15
11
36
1.83
14694--14796
45
2.3
44
83
5
118
35
14
11
37
1.83
16520--16763
22
11.1
22
74
10
142
38
17
11
32
1.85
16792--16852
22
2.7
23
82
10
72
31
27
3
37
1.73
16895--17016
22
5.5
22
72
11
88
32
13
13
40
1.82
16894--17018
44
2.8
44
85
0
151
32
13
13
40
1.84

Tables:   1

The End!