Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022849.1 Corchorus olitorius cultivar O-4 contig22882, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17730

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2572--2635
6
11.2
6
84
15
91
82
17
0
0
0.66
2566--2644
11
7.3
11
88
8
117
79
18
1
0
0.80
2575--2627
5
9.8
5
84
15
70
83
16
0
0
0.66
8157--8189
15
2.1
15
94
5
57
84
15
0
0
0.61
8157--8189
16
2.1
16
94
0
57
84
15
0
0
0.61
8565--8598
15
2.2
16
94
5
61
64
14
5
14
1.46
11838--11910
21
3.4
21
75
1
65
15
20
45
19
1.86
12875--12932
24
2.4
24
91
0
89
29
25
22
22
1.99
15212--15282
21
3.4
20
71
24
58
38
15
11
35
1.83
15624--15665
15
2.7
15
92
3
66
64
14
9
11
1.50

Tables:   1

The End!