Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022850.1 Corchorus olitorius cultivar O-4 contig22883, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8904

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1828--1928
27
3.7
27
87
2
130
41
23
15
18
1.89
2179--2383
69
3.0
69
83
7
229
26
23
19
30
1.98
2185--2308
34
3.6
35
70
12
112
27
24
20
27
1.99
2290--2648
35
10.3
35
91
1
535
27
21
20
30
1.98
3026--3384
35
10.3
35
90
1
526
27
21
20
30
1.98
3872--4018
50
2.9
50
88
0
186
36
12
17
32
1.88
4603--4637
14
2.6
14
91
8
56
14
0
14
71
1.15
4597--4653
19
2.8
19
82
15
53
15
1
14
68
1.29
8822--8904
42
2.0
42
88
2
123
48
12
16
22
1.80

Tables:   1

The End!